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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19489557_19490231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19489557 - 19490231

Intron Length:

675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTAAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

QERNFNSLPELHASSSGFKA

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.2

38.5

Major BPS

87.3

0.93

0.8

36.5

Major PPT

77.1

0.61

74.1

39.5

Minor 5ss

38.8

-1.3

50.2

46.4

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689