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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19492969_19495683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19492969 - 19495683

Intron Length:

2715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGCAAC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GGTGCATTCACT

Flanking Amino Acid:

CTVQLVQAAKAHCHYITVKN

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.2

73.5

37.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.8

0.8

77.4

41.2

Minor 5ss

-1.6

2.7

43.3

Minor BPS

49.1

0.02

2.2

70.8

45.5

Associated Gene:

Gene:

ACOX2

Ensembl Gene ID:

ENSAPLG00000005757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043378

19481311 - 19497077

15767

ENSAPLT00000006003

19481311 - 19497999

16689