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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19520916_19521454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19520916 - 19521454

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTTACA

Flanking Amino Acid:

KKKRKILARKKSKRSAYESG

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

70.7

0.47

1.1

70.2

39.4

Minor 5ss

41.2

-1

2.9

58.4

45.7

Minor BPS

64.3

0.44

1.9

78.01

37.8

Associated Gene:

Gene:

PXK

Ensembl Gene ID:

ENSAPLG00000005874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046909

19519711 - 19548423

28713

ENSAPLT00000041962

19519711 - 19548423

28713

ENSAPLT00000006144

19512812 - 19536781

23970

ENSAPLT00000048175

19512812 - 19548423

35612