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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19532398_19536700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19532398 - 19536700

Intron Length:

4303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CTGTTAGTAATT

Flanking Amino Acid:

DFDLLNNSLQISTLSLPLPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

81.2

0.7

0.9

86.4

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

47.2

-0.1

2.2

67.84

43.8

Associated Gene:

Gene:

PXK

Ensembl Gene ID:

ENSAPLG00000005874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046909

19519711 - 19548423

28713

ENSAPLT00000026951

19527804 - 19548423

20620

ENSAPLT00000006144

19512812 - 19536781

23970