Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19552435_19552895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19552435 - 19552895

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGAGGG

5'SS Class:

major

3'SS Sequence:

TATCTTTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TTATCTTTACAT

Flanking Amino Acid:

VAALKELHGEVGAALPVDVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

42.4

Major BPS

78.2

0.7

77.9

32.1

Major PPT

73.1

0.52

0.9

69.4

35.6

Minor 5ss

23.3

-3.1

3.2

29.5

43.3

Minor BPS

64.7

0.54

1.7

81.97

39.4

Associated Gene:

Gene:

RPP14

Ensembl Gene ID:

ENSAPLG00000006272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006494

19551047 - 19553785

2739