Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19633355_19633873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19633355 - 19633873

Intron Length:

519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GAATCCTTATTT

Flanking Amino Acid:

VMIRAFPANAACFLGFEVAM

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

83.6

29.8

Major BPS

78.8

0.72

67.9

40.1

Major PPT

79.6

0.67

0.8

71.8

38.1

Minor 5ss

35.5

-1.6

2.7

43.1

43.9

Minor BPS

64.8

0.54

1.6

75.18

41.3

Associated Gene:

Gene:

SLC25A20

Ensembl Gene ID:

ENSAPLG00000029472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031111

19633292 - 19643284

9993