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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19633999_19635246_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19633999 - 19635246

Intron Length:
1248

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
TTGTCTCTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTAAT

U12 Branch Point Sequence:
TACAGCTTAGCT

Flanking Amino Acid:
PDVLKSRFQTAPPGKYPNGF

Intron Amino Acid Position:
167

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.7
0.79
0.9
78.2
37.9

Major BPS
70.5
0.51
1.1
69.7
35.5

Major PPT
86.1
0.81
0.8
81.1
30.9

Minor 5ss
32.5
-2
2.8
43.2
43.8

Minor BPS
49.8
0.06
2.1
69.92
46.5

Associated Gene:

Gene:
SLC25A20

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19633292 - 19643284
9993