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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19659102_19660789_F

Intron Information:

Intron Rank:
3
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
19659102 - 19660789
Intron Length:
1688

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTAAGTGCA
5'SS Class:
strong_major
3'SS Sequence:
ATTGCCTTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTGAT
U12 Branch Point Sequence:
CGTTCTTTAATT
Flanking Amino Acid:
FHWQISEILERHKSNAAQLL
Intron Amino Acid Position:
106

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
95.6
1.07
0.7
84.1
26.6
Major BPS
87.6
0.93
0.8
77.4
37.3
Major PPT
81.4
0.71
0.8
77.7
36
Minor 5ss
33
-1.9
3.1
41.6
45
Minor BPS
77.8
0.95
1.1
84.22
37.1

Associated Gene:

Gene:
ARIH2
Ensembl Gene ID:
ENSAPLG00000006502
Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000006779
19644027 - 19672022
27996