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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19660854_19662789_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19660854 - 19662789

Intron Length:

1936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

TTTCCCTGTAAT

Flanking Amino Acid:

ARVQPTSSKHAMVHSSHHCA

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

81.7

0.71

0.8

77.1

31.6

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

55.2

0.24

80.26

40.7

Associated Gene:

Gene:

ARIH2

Ensembl Gene ID:

ENSAPLG00000006502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006779

19644027 - 19672022

27996