Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19682968_19683397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19682968 - 19683397

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTGA

5'SS Class:

major

3'SS Sequence:

TTCTGAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

CAGTTCTGAATT

Flanking Amino Acid:

NQDGQLQLKEVLTHTRLGNG

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

59.9

41.6

Major BPS

82.1

0.8

71.6

36.4

Major PPT

78.2

0.63

0.9

74.5

39.1

Minor 5ss

34.1

-1.8

3.6

46.6

48.7

Minor BPS

59.6

0.38

1.5

69.3

Associated Gene:

Gene:

P4HTM

Ensembl Gene ID:

ENSAPLG00000006841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048095

19673882 - 19689033

15152

ENSAPLT00000007092

19673882 - 19689033

15152