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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19694663_19694753_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
19694663 - 19694753
Intron Length:
91

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTGAGCGCA
5'SS Class:
strong_major
3'SS Sequence:
ACTCCTTTCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTGAC
U12 Branch Point Sequence:
ACTCCTTTCACA
Flanking Amino Acid:
TLNFSCLREEGEWLLLFNYL
Intron Amino Acid Position:
437

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
84.5
0.81
0.9
71.1
34.7
Major BPS
69.1
0.47
1
60.7
37.6
Major PPT
77.8
0.62
0.8
71.8
32
Minor 5ss
31.2
-2.2
3.2
38.8
46.5
Minor BPS
57.3
0.22
1.7
66.76
39.9

Associated Gene:

Gene:
DALRD3
Ensembl Gene ID:
ENSAPLG00000006918
Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000007192
19693991 - 19698073
4083