Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19705646_19709168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19705646 - 19709168

Intron Length:

3523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

CTCTCCCCACCT

Flanking Amino Acid:

GSGSICITQEVLACGRPQAT

Intron Amino Acid Position:

336

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

68.9

0.43

0.8

62.5

27.2

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

46.8

-0.1

2.2

68.62

47.8

Associated Gene:

Gene:

IMPDH2

Ensembl Gene ID:

ENSAPLG00000006986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007288

19704413 - 19715913

11501