Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19709993_19711003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19709993 - 19711003

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

CTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

GTTGGTTGAAAT

Flanking Amino Acid:

VQAGVDAVVLDSSQGNSIFQ

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

69.4

36.6

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

85.3

0.79

0.8

80.2

31.8

Minor 5ss

34.4

-1.8

2.8

37.9

40.9

Minor BPS

46.4

-0.2

66.62

43.9

Associated Gene:

Gene:

IMPDH2

Ensembl Gene ID:

ENSAPLG00000006986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007288

19704413 - 19715913

11501