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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19711204_19712444_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
19711204 - 19712444

Intron Length:
1241

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCTGCG

5'SS Class:
major

3'SS Sequence:
TGTTTGTTTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGGTGAT

U12 Branch Point Sequence:
CCAGGGCTAACG

Flanking Amino Acid:
ANEILQRSKKGKLPIVNEDD

Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.2
60.8
44.2

Major BPS
66.1
0.4
1.3
57.1
49.4

Major PPT
85.2
0.79
0.9
76.9
42.1

Minor 5ss
37.5
-1.4
3.3
50.5
46

Minor BPS
34.6
-1.3
2.5
35.86
45.6

Associated Gene:

Gene:
IMPDH2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19704413 - 19715913
11501