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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1971377_1972236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1971377 - 1972236

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TATTTCTTACAC

Flanking Amino Acid:

YSFSPKANEWEKTDIEGTLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

75.8

34.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

83.9

0.76

0.7

80.1

25.3

Minor 5ss

32.5

-2

3.1

35.2

41.4

Minor BPS

61.9

0.35

1.7

72.44

38.3

Associated Gene:

Gene:

DCP1A

Ensembl Gene ID:

ENSAPLG00000014921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015566

1971236 - 2003138

31903