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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19715665_19715815_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
19715665 - 19715815

Intron Length:
151

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTGGGGACG

5'SS Class:
major

3'SS Sequence:
CCCGTCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCCC

U12 Branch Point Sequence:
TCTCCCCGTCCC

Flanking Amino Acid:
LFSCGDGLTYNDFLILPGYI

Intron Amino Acid Position:
33

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.9
0.35
1.1
56.8
42.2

Major BPS
28.8
-1.3
4.1
60.7
37.6

Major PPT
68
0.4
0.8
61
29.2

Minor 5ss
27.5
-2.6
3.2
31.3
36.5

Minor BPS
32.2
-1.4
3.6
53.95
43.4

Associated Gene:

Gene:
IMPDH2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19704413 - 19715913
11501