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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1974266_1983303_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1974266 - 1983303

Intron Length:

9038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTGTCTTACACT

Flanking Amino Acid:

EPFLLYRNASLSIYSIWFYD

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

76.5

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

83.5

0.75

0.9

83.1

32.3

Minor 5ss

36.8

-1.5

2.9

52.2

44.4

Minor BPS

55.8

0.26

2.1

79.01

43.8

Associated Gene:

Gene:

DCP1A

Ensembl Gene ID:

ENSAPLG00000014921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015566

1971236 - 2003138

31903