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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19750435_19750650_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
19750435 - 19750650

Intron Length:
216

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGATGCAG

5'SS Class:
major

3'SS Sequence:
CTTGTCCCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGCTGAG

U12 Branch Point Sequence:
GGGTGCTGAGGC

Flanking Amino Acid:
TEADLEKKPKATKARLVQEE

Intron Amino Acid Position:
205

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.8
0.54
1
58.4
42

Major BPS
52.2
0.06
1.6
51.1
46.3

Major PPT
80.3
0.68
0.8
73.8
31.3

Minor 5ss
24.7
-2.9
3
29.1
43.4

Minor BPS
39
-0.8
2.1
44.7
43.1

Associated Gene:

Gene:
QARS1

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19746576 - 19754949
8374