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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19759517_19759674_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
19759517 - 19759674

Intron Length:
158

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGACG

5'SS Class:
major

3'SS Sequence:
CCCCGTCCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGGTGAC

U12 Branch Point Sequence:
AGCCCGGTGACG

Flanking Amino Acid:
CLIDLSMVTQGGMYVFQLFD

Intron Amino Acid Position:
469

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1
63.1
43

Major BPS
47.5
-0.1
1.3
38.2
41.7

Major PPT
62.4
0.28
0.8
53.4
31.1

Minor 5ss
25.7
-2.8
3.1
30.8
42.9

Minor BPS
38.7
-1
2.5
42.82
42.5

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

19758102 - 19762590
4489