Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19790651_19790724_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790651 - 19790724

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

GCCCACCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GATTGCCCACCC

Flanking Amino Acid:

RDHTDGERCQRCANGHFGNP

Intron Amino Acid Position:

967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

61.2

0.25

0.9

50.1

33.8

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

40.2

-0.7

2.3

53.56

43.5

Associated Gene:

Gene:

LAMB2

Ensembl Gene ID:

ENSAPLG00000008249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019840

19786732 - 19797169

10438

ENSAPLT00000008572

19786732 - 19795991

9260