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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19790957_19791063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19790957 - 19791063

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GGGTGCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCAGAC

U12 Branch Point Sequence:

GGGGGCAGACCC

Flanking Amino Acid:

TFGFGPGGCRACQCSSEGSV

Intron Amino Acid Position:

890

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

42.6

-0.4

1.2

32.1

34.8

Major PPT

67.2

0.39

58.3

43.1

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

33.7

-1.2

37.47

39.9

Associated Gene:

Gene:

LAMB2

Ensembl Gene ID:

ENSAPLG00000008249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019840

19786732 - 19797169

10438

ENSAPLT00000008572

19786732 - 19795991

9260