Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19794124_19794674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19794124 - 19794674

Intron Length:

551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGCCCTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAT

U12 Branch Point Sequence:

ATCGCTGCCACT

Flanking Amino Acid:

IRDPYSPAIQDLLRVTNLRV

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

66.6

39.6

Major BPS

47.8

-0.1

1.6

58.2

48.3

Major PPT

69.9

0.45

65.1

36.2

Minor 5ss

27.1

-2.6

26.2

36.9

Minor BPS

38.7

-0.8

2.4

57.49

45.8

Associated Gene:

Gene:

LAMB2

Ensembl Gene ID:

ENSAPLG00000008249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008572

19786732 - 19795991

9260

ENSAPLT00000019840

19786732 - 19797169

10438