Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19800918_19800999_R

Intron Information:

Intron Rank:

146933

Intron Class:

major

Intron Phase:

Intron Coordinates:

19800918 - 19800999

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGGGC

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGCCAC

U12 Branch Point Sequence:

GTGTCCCCACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

58.8

40.6

Major BPS

43.9

-0.3

1.4

49.9

45.3

Major PPT

69.1

0.43

0.9

61.3

35.1

Minor 5ss

24.6

-2.9

3.4

32.5

42.6

Minor BPS

40.6

-0.8

2.1

46.68

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043221

19796436 - 19811305

14870