Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19805366_19805440_R

Intron Information:

Intron Rank:

146946

Intron Class:

major

Intron Phase:

Intron Coordinates:

19805366 - 19805440

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGTGGT

5'SS Class:

major

3'SS Sequence:

CTGCCCTGCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAG

U12 Branch Point Sequence:

GGGCACTGAGCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

63.3

43.1

Major BPS

48.9

-0

1.5

46.7

38.9

Major PPT

66.2

0.36

0.9

60.8

35.1

Minor 5ss

27.5

-2.6

3.3

31.6

42.7

Minor BPS

-0.5

1.8

48.13

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026359

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043221

19796436 - 19811305

14870