Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19828300_19828731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19828300 - 19828731

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGCGAT

5'SS Class:

major

3'SS Sequence:

GCTGGTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CCTGCCTCACCC

Flanking Amino Acid:

PSMGIAAVQRDGAVYALGGM

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

68.4

38.7

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

71.2

0.48

63.8

41.7

Minor 5ss

31.2

-2.2

3.6

45.4

49.7

Minor BPS

47.8

-0.1

57.89

47.1

Associated Gene:

Gene:

KLHDC8B

Ensembl Gene ID:

ENSAPLG00000019922

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039964

19827924 - 19830408

2485