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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1983371_1988405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1983371 - 1988405

Intron Length:

5035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

AAATTGTGAAAA

Flanking Amino Acid:

DCHRIAKLMAKVVEQEAQRS

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

85.4

0.8

80.4

31.6

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

44.1

-0.4

2.1

54.04

37.5

Associated Gene:

Gene:

DCP1A

Ensembl Gene ID:

ENSAPLG00000014921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015566

1971236 - 2003138

31903