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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19839477_19842968_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19839477 - 19842968

Intron Length:

3492

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGCTATTG

5'SS Class:

weak_major

3'SS Sequence:

GATTCACTCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAC

U12 Branch Point Sequence:

GATTCACTCACA

Flanking Amino Acid:

KVRNVWCTLSRFRPNK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.9

0.19

1.1

52.5

41.3

Major BPS

64.5

0.36

1.2

69.3

37.7

Major PPT

70.1

0.45

0.9

62.1

38.6

Minor 5ss

34.7

-1.7

3.3

38.4

46.6

Minor BPS

46.3

-0.2

2.3

63.81

41.6

Associated Gene:

Gene:

CCDC36

Ensembl Gene ID:

ENSAPLG00000016107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016798

19839459 - 19856417

16959