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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19854392_19855124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19854392 - 19855124

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

CCTGCTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TGTTGTTTACTG

Flanking Amino Acid:

LLEMERRLAAKDMEISDVKC

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.3

63.7

42.9

Major BPS

71.4

0.53

1.1

63.4

Major PPT

73.5

0.53

0.8

64.8

36.4

Minor 5ss

33.9

-1.8

3.2

44.7

43.5

Minor BPS

48.8

-0.2

2.1

59.22

43.5

Associated Gene:

Gene:

CCDC36

Ensembl Gene ID:

ENSAPLG00000016107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016798

19839459 - 19856417

16959