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Intron Name: Anas_platyrhynchos_platyrhynchos_13_1988545_1992593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1988545 - 1992593

Intron Length:

4049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

TTTTCCCCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LSKAKDEYERNQISDLSIMS

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

68.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.1

0.72

0.7

74.2

30.9

Minor 5ss

32.8

-2

3.1

41.8

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

DCP1A

Ensembl Gene ID:

ENSAPLG00000014921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015566

1971236 - 2003138

31903