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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19940502_19943935_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19940502 - 19943935

Intron Length:

3434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTGGG

5'SS Class:

major

3'SS Sequence:

CTCTGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TCTCCCTTCATG

Flanking Amino Acid:

KICAWMQLLAALCLVLGCMI

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.2

47.1

Major BPS

0.62

1.1

77.2

Major PPT

74.8

0.56

0.8

68.9

31.6

Minor 5ss

36.2

-1.6

3.4

49.2

47.1

Minor BPS

58.7

0.13

1.9

64.41

43.9

Associated Gene:

Gene:

LHFPL4

Ensembl Gene ID:

ENSAPLG00000019972

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023975

19939342 - 19945027

5686