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Intron Name: Anas_platyrhynchos_platyrhynchos_13_19965_20500_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19965 - 20500

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TCCCCTTCTATT

Flanking Amino Acid:

FHAVPFVLQKDPKCGQKVHE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

71.6

0.54

33.1

Major PPT

85.3

0.79

0.7

84.1

30.5

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

46.2

-0.2

1.8

61.04

43.2

Associated Gene:

Gene:

OVCH2

Ensembl Gene ID:

ENSAPLG00000004207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004323

10484 - 20591

10108