Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_19972579_19972863_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19972579 - 19972863

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGGAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

GTGACACGAATT

Flanking Amino Acid:

TIAFDYEYNICNYKVDCACH

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

58.9

0.22

49.8

35.1

Major PPT

69.3

0.44

1.1

66.3

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

43.3

-0.4

60.92

42.2

Associated Gene:

Gene:

SETD5

Ensembl Gene ID:

ENSAPLG00000007096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007409

19948484 - 19987618

39135