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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20030423_20031116_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20030423 - 20031116

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

TGTCTCTGAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

TGTCTCTGAATA

Flanking Amino Acid:

RENQDYIPGEKTPMLEDADE

Intron Amino Acid Position:

1937

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

68.6

39.1

Major BPS

49.8

-0

1.4

64.2

Major PPT

65.5

0.35

62.3

38.6

Minor 5ss

39.6

-1.2

2.9

45.7

43.5

Minor BPS

62.3

0.38

1.4

70.42

35.3

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252