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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20033719_20034313_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20033719 - 20034313

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TACTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TCTTTGTGACCA

Flanking Amino Acid:

VAKNPKLMLRRTETVVEKLL

Intron Amino Acid Position:

1743

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

73.5

0.58

73.6

32.5

Major PPT

83.7

0.76

0.8

30.6

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

45.7

-0.3

2.3

63.1

43.6

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252