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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20039749_20039947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20039749 - 20039947

Intron Length:

199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGATCA

5'SS Class:

major

3'SS Sequence:

TTGTCTCTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATCCTTTATT

Flanking Amino Acid:

SVLLGDLPCRILSEMTEDQL

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

73.4

31.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.3

0.44

37.9

Minor 5ss

40.7

-1

53.4

43.5

Minor BPS

70.1

0.71

1.6

82.12

39.3

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252