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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20043788_20044836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20043788 - 20044836

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

GGTGTCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAC

U12 Branch Point Sequence:

TGACACTTACAC

Flanking Amino Acid:

DLCPAPLIHSVYPLSGPVEG

Intron Amino Acid Position:

1141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.1

70.8

34.7

Major BPS

60.5

0.26

1.1

70.3

34.5

Major PPT

76.6

0.6

69.4

41.7

Minor 5ss

33.5

-1.9

2.8

46.6

41.8

Minor BPS

46.5

-0.2

1.9

56.43

40.9

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252