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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20046485_20047473_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20046485 - 20047473

Intron Length:

989

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTAGC

5'SS Class:

major

3'SS Sequence:

TTCTCCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TGCTGTATAAAT

Flanking Amino Acid:

LLGKNFHLYQDQQWDYECVL

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

42.1

Major BPS

74.5

0.61

79.6

29.1

Major PPT

81.8

0.72

0.7

77.6

24.4

Minor 5ss

34.8

-1.7

45.9

42.3

Minor BPS

46.7

-0.1

2.1

66.64

43.9

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252