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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20048878_20049010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20048878 - 20049010

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGCGTCCC

5'SS Class:

major

3'SS Sequence:

TGTTTTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCCTCTCACCT

Flanking Amino Acid:

EEGIIIYNERAQLPTSSVFP

Intron Amino Acid Position:

686

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

56.9

42.5

Major BPS

72.7

0.56

30.1

Major PPT

84.4

0.77

0.7

77.9

36.6

Minor 5ss

28.5

-2.5

2.9

Minor BPS

51.6

0.13

1.9

73.07

43.9

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252