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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20049120_20049212_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20049120 - 20049212

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGCACC

5'SS Class:

weak_major

3'SS Sequence:

ACCACTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTTTCTACCACT

Flanking Amino Acid:

AAVALLWKSAPCQKCVSSPW

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.5

0.22

1.3

57.1

42.2

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

71.9

0.49

0.9

61.6

39.3

Minor 5ss

37.1

-1.5

2.9

49.1

40.1

Minor BPS

49.8

0.06

2.2

81.08

40.7

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252