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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20049322_20052406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20049322 - 20052406

Intron Length:

3085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAATTTTTATTT

Flanking Amino Acid:

SQAPTLPAGADHVTIKLVVR

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.9

0.92

0.7

88.9

28.1

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

55.1

0.24

1.5

67.67

37.5

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252