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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20052564_20053243_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20052564 - 20053243

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGCAAT

5'SS Class:

major

3'SS Sequence:

ATTGAATTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TGTTATTGAATT

Flanking Amino Acid:

ANISREEKRNIFLAISDLPS

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

76.1

34.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

64.8

0.33

1.1

59.1

45.5

Minor 5ss

-1.3

3.1

53.2

Minor BPS

61.1

0.43

1.6

78.73

37.3

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252