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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20053377_20054058_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20053377 - 20054058

Intron Length:

682

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATAG

5'SS Class:

strong_major

3'SS Sequence:

TATTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCTTGCTATTT

Flanking Amino Acid:

PYCGWCVLQGRCSRRSECLR

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

38.5

Major BPS

72.7

0.56

30.1

Major PPT

86.9

0.83

0.7

81.7

29.8

Minor 5ss

37.8

-1.4

3.1

48.2

47.3

Minor BPS

43.4

-0.4

2.4

67.42

44.2

Associated Gene:

Gene:

PLXNB1

Ensembl Gene ID:

ENSAPLG00000008562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008965

20028749 - 20061000

32252