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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20105468_20106940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20105468 - 20106940

Intron Length:

1473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTTCTTCTAATC

Flanking Amino Acid:

LATLEHRLLQEEKRYRAAYL

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

1.1

78.8

38.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.9

0.74

0.9

77.3

Minor 5ss

47.5

-0.2

2.6

67.8

Minor BPS

51.6

0.03

1.6

63.52

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021398

20104691 - 20107748

3058

ENSAPLT00000010660

20104691 - 20109382

4692