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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20121125_20122121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20121125 - 20122121

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGATTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCAAAGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAC

U12 Branch Point Sequence:

CTGTTACTAACA

Flanking Amino Acid:

EEEAAKLENGEVKDATGPEQ

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

79.5

29.5

Major BPS

76.8

0.67

0.9

75.9

Major PPT

60.6

0.24

37.7

Minor 5ss

47.6

-0.2

2.8

64.6

46.8

Minor BPS

49.5

-0

64.65

41.7

Associated Gene:

Gene:

CCDC174

Ensembl Gene ID:

ENSAPLG00000010346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010796

20115903 - 20130366

14464