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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20122608_20122996_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20122608 - 20122996

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATACTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTCATGAACT

Flanking Amino Acid:

PIHYEDIRENEARQLGVGYF

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

60.9

38.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

0.47

2.4

72.8

39.5

Minor BPS

64.2

0.52

1.7

80.91

40.2

Associated Gene:

Gene:

CCDC174

Ensembl Gene ID:

ENSAPLG00000010346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010796

20115903 - 20130366

14464