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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20124656_20126569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20124656 - 20126569

Intron Length:

1914

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGGTACT

5'SS Class:

major

3'SS Sequence:

TCTTTCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTTTCTTTCATT

Flanking Amino Acid:

IPPPEDPDEEWVDYVDFLGR

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

69.2

41.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

86.6

0.82

0.7

80.9

29.7

Minor 5ss

33.5

-1.9

2.9

41.7

38.6

Minor BPS

73.9

0.83

1.6

91.31

32.6

Associated Gene:

Gene:

CCDC174

Ensembl Gene ID:

ENSAPLG00000010346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010796

20115903 - 20130366

14464