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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20129841_20130324_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20129841 - 20130324

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GCTGCTGATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGTTTGCCAACT

Flanking Amino Acid:

KKPLDVAASSLVDLKAELFR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

54.4

44.7

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

60.8

0.24

54.5

40.5

Minor 5ss

30.8

-2.2

3.3

38.2

46.7

Minor BPS

45.9

-0.2

2.4

73.49

43.1

Associated Gene:

Gene:

CCDC174

Ensembl Gene ID:

ENSAPLG00000010346

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010796

20115903 - 20130366

14464