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Intron Name: Anas_platyrhynchos_platyrhynchos_13_2028673_2029919_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2028673 - 2029919

Intron Length:
1247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAACTGGT

5'SS Class:
major

3'SS Sequence:
TCCCTCTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATTCAC

U12 Branch Point Sequence:
TGTTCCTGTATG

Flanking Amino Acid:
IECYIAEQNMVSIAVGCATR

Intron Amino Acid Position:
204

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1.2
68.8
42.2

Major BPS
73.5
0.58
0.9
75.4
28.3

Major PPT
85.7
0.8
0.7
83.6
24.5

Minor 5ss
40.1
-1.1
3.3
55.5
43.9

Minor BPS
55.6
0.03
1.9
65.18
42.4

Associated Gene:

Gene:
TKT

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2016534 - 2039226
22693

2022523 - 2039353
16831