Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_20344833_20345044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20344833 - 20345044

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGAGTG

5'SS Class:

major

3'SS Sequence:

CTCTTCCTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTGCCCTGACCT

Flanking Amino Acid:

RQKKKEHKSSLSLASSTVGP

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

69.9

41.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

81.2

0.7

75.6

26.6

Minor 5ss

35.4

-1.7

3.5

46.6

42.3

Minor BPS

52.1

0.15

1.8

70.2

46.3

Associated Gene:

Gene:

GRIP2

Ensembl Gene ID:

ENSAPLG00000010553

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011017

20299486 - 20377971

78486