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Intron Name: Anas_platyrhynchos_platyrhynchos_13_20406223_20409663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20406223 - 20409663

Intron Length:

3441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

ACAGACTAAACG

Flanking Amino Acid:

IWKGVKSTGKVVYITATFPF

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

75.4

0.57

1.1

69.2

46.1

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

45.3

-0.4

47.27

45.5

Associated Gene:

Gene:

SLC6A6

Ensembl Gene ID:

ENSAPLG00000011407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026606

20391568 - 20438148

46581

ENSAPLT00000025993

20391568 - 20438148

46581

ENSAPLT00000012118

20391568 - 20438148

46581